Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015871799.1_cds_XP_016434541.1_30588
CDS Infomation

[gene=LOC107760920] [db_xref=GeneID:107760920] [protein=mechanosensitive ion channel protein 10-like] [protein_id=XP_016434541.1] [location=complement(join(5619..5892,6703..6905,7292..7585,7823..7946,9017..10140))] [gbkey=CDS]
Sequence

ATGGAGAAACCAGCCTCTGATCATGTGATTCTGTTCATGGATGAAGAAGATCACAAGAAC
AATAATCCCTCAGACAATTCACAACCTAGGAACACCATTAATGATGCCAATTACATGGCA
GAAACAAAACTTACCAGAATTCCTACAAAATTTCAAACACTACATCGCCTCACTTTCTCA
AAACCCAAAGCTCGAGTCTTTGAGTTCAATAGTGTTCCAATGAAGCAAAAATCTTTCAAC
TTAGACGACGAATTCGAGTCCTTCAAGCCCTGTGAAAAGGATGGAGATAGTGATGAAGAA
CATGAAAATGATGAAGGATTTGGGATTACTAAAGAAAAGTGTAGAAAGAAGACGACAAAA
ATCCCTTTTAGACTTTTGTTTGAGTGGTGCTTTTTTTTAATCACAACCTCTTGTTTAATA
TGTGCTCTCACAATTTTACCTCTTAGGAACAATCCCTTATGGGGTCTTGACTTGTGGAAA
TGGTGCTTAGTGATCCTTGTCATATTCAGTGGTCGCCTTGTTTCAAGTTGCGTAATTAGA
TTCCTCGTTTTCCTCATCGAGAGAAACTTCATGCTTCGTGAAAAGGTCTTATATTTTGTC
TATGGTCTTAGAAAGAGCTTCCAAAATTGTGTTTGGTTAGGTCTTGTCCTTTTAGCTTTG
ACTTTCATGTTCAACACAAAACTCAACAAACAAAACAAGATGTTAACAAAATTACGTGAA
GCTTTAGTGGCCTTACTCATTGGTGCAACAATTTGGCCCGTTAAGATCATTTTGGTCAAA
GTTTTAGCCTCGTCGTTTTTTGTTGCAACTTATTTTGAACGTATGAAGGAAAGTGTTTTT
CATCACTATGTCCTAGACACACTTTCTGGTCCTCCAGTTGATGAAAAAGTGGTACAAGTG
AAAGAACCGAGGAAATTATCGAAGTTAAAGAAGCTGAGTATGCAAAGAAAGTCATCTGCA
TGGAGTGTGAAGAGATTGGCTAATTATGTAAGGTTCTTTGGTTTGTCAACTATTTCTAAA
AGTGTGGATGAATTTGGAAACACTGAATCTGAGATTACAAGTGAATTGGAGGCTAGAAAT
TGTGCCAAAAAGATCTTCAAGAACGTTGCCAATCCTGGTGCCAAGTACATAGAGGAGGAA
GATTTAATGAGGTTCCTGAATAGAGTAGAGATACACACCATTTTCCCACTCTTTGAAGGA
GCTCTTGAGACTGGAAGAATCACCAAATCTGCTTTCAGAAATTGGGTGGTAAGAGCATAC
TATGAGAGGAAGTACTTGGCACATTCATTAAATGATACAAAGACGGCAGTGCAACAGCTT
CACAAGTTAGCAAGTGGGATAGTGGGTTTTATAATACTTGTGATTTCACTCTTAGTGATG
GGACTGTTGTCTACACAAGTCCTTGCTCTCCTTCTATCGCAACTTGTACTTCTCGGATTT
GCTTTCCAAAACACTTGCAAGACTATCTTCGAATCTATTATCTTCGTCTTTGTTGTCCAT
CCTTTTGACATTGGCGATCGTTGTGTTATCGATGGAGTTCAGCTGATAGTGGAAGAGATG
AATATATTGACCACAGTTTTCCTCCGTTACGACAATGAAAAAATCTACTACCCCAATGCA
GTATTGATCACAAAGCCGATTAGCAACTTCTACAGAAGCCCAGAAATGTGCGATTCCATT
TCTTTTGATATTGATACCAACACTTCTATGGACACCATCATTGCCCTCAAAAAGGCCATT
CAAATGTACATAGAGAGCAAGCCAAAGTATTGGAATCCAAAACACTCAGTGATAGTGAAA
GGAATAGAGAATGTGCACACAATGGGAATGGCTCTATGTGTTCAACATACCATTAACCAT
CAGAATTATGGGGATAGAAGCAACAGGATCACAGAGCTCATCCTTGAGTTGAAGAAGATC
TTTGAGAGCCTTAACATCAAGTACTCTCTTCTCCCTCAACAACTCCATCTTCCCCAAGTG
AACATTACCAATTTCAGAAATGTGCCATTGCACACTTGA

Peptide Sequence

PEP ID

XP_016434541.1
PEP Infomation

PREDICTED: mechanosensitive ion channel protein 10-like [Nicotiana tabacum]
Sequence

MEKPASDHVILFMDEEDHKNNNPSDNSQPRNTINDANYMAETKLTRIPTKFQTLHRLTFS
KPKARVFEFNSVPMKQKSFNLDDEFESFKPCEKDGDSDEEHENDEGFGITKEKCRKKTTK
IPFRLLFEWCFFLITTSCLICALTILPLRNNPLWGLDLWKWCLVILVIFSGRLVSSCVIR
FLVFLIERNFMLREKVLYFVYGLRKSFQNCVWLGLVLLALTFMFNTKLNKQNKMLTKLRE
ALVALLIGATIWPVKIILVKVLASSFFVATYFERMKESVFHHYVLDTLSGPPVDEKVVQV
KEPRKLSKLKKLSMQRKSSAWSVKRLANYVRFFGLSTISKSVDEFGNTESEITSELEARN
CAKKIFKNVANPGAKYIEEEDLMRFLNRVEIHTIFPLFEGALETGRITKSAFRNWVVRAY
YERKYLAHSLNDTKTAVQQLHKLASGIVGFIILVISLLVMGLLSTQVLALLLSQLVLLGF
AFQNTCKTIFESIIFVFVVHPFDIGDRCVIDGVQLIVEEMNILTTVFLRYDNEKIYYPNA
VLITKPISNFYRSPEMCDSISFDIDTNTSMDTIIALKKAIQMYIESKPKYWNPKHSVIVK
GIENVHTMGMALCVQHTINHQNYGDRSNRITELILELKKIFESLNIKYSLLPQQLHLPQV
NITNFRNVPLHT

Transcript Sequence

Gene sequence data has not been registered.